I don't know photo suite, but if it is a picture browser, it may only record shortcuts to the files and not make copies.
If so, then how to remove the unwanted files from its index? Perhaps p. s. has some way of cancelling the list it holds without actuall deleting anything.
When you have solved this one, i strongly recommend making a new folder for all your photos.
My Documents is Windows default to save beginners from storing things all over the place.
On my HD My documents doesn' even hold my Word docs.